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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911729.1_cds_XP_016461750.1_55043
CDS Infomation

[gene=LOC107785043] [db_xref=GeneID:107785043] [protein=G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X2] [protein_id=XP_016461750.1] [location=join(12832..13778,13949..14268,15672..15809,15965..16089,16160..16370,16472..16709,16808)] [gbkey=CDS]
Sequence

ATGAAAGGGCGACCTTCTTTAGTTTTTTGCTCCATTTTTTTTTCCATCTTAATAATTTCC
ACAGCATTAGACACGATCACTACAGATAAACCCATTAGAGATGGTGACACAATTGTTTCA
GCTGGTGGAGTTTATGAACTTGGATTTTTCAGCCCTGGAAATTCCAAGAATCGCTATGTT
GGGATATGGTACAAGAAGATATCACCTAGAACTGTCGTCTGGGTTGCCAACAGAAACATT
CCTCTGAATGACACTTCAGGAGTGTTAACACTAAGACCCAATGGAATTCTTGTACTTATC
AACAGTTCCAATGCTTCAATTTGGTCATCAAACTCGTCAAGATCCTTAAAGAATGCAGAA
GCACGGCTCCTGGACTCTGGGAACCTTGTTGTCAGTGATGGAAATGATAGAGATCCTGAA
ATTAATTTCGCGTGGCAGAGTTTTGATTATCCAGGTAATACTTTATTACCTGGCATGAAG
CTTGGACGTAACTTGGTTACGGGCATGGATTGGTACATATCGTCATGGAAGAGCACCGAT
GATCCTGCTCCTGGTGAATGTATAGAACGTCTTGATTCTCATGGATACCCGCAATTTTTC
GTGTGGAAAAATTCGTCTATAGTATTTAGCACAGGGCCATGGAATGGTATTGCATTTAGT
TCTAGTCCTAATATTAAGCCAACTATATATTACACTTTCGGGTTTGTCATTAACCAGCAG
GAAATTTACTTCAAATATGAGCTTAATGAGCCCCTGCCCACCAGGATTGTGATCAACCAG
GCTGGGACGGTAGATCAACTAACATGGATTGAGCGCAGTCACAGCTGGTTACTCTACGTG
GCAACACAATCTGATACTTGTGATCGTTTTTCTTTATGTGGTCCTTATGCTAGTTGCAAC
ATCAATAACTCTCCTCCATGTGACTGTTTACAAGGTTTTGAACCTAGGTATCCTAATCAA
TGGTATGCAGCGGACTGGTCTAGTGGTTGTGTAAGGAGAACTCCTTTGGCTTGTAACCAA
GATGGTTTTCTTAAATTGACGGGTATTAAGATGCCGAATTCTAGACACTCGTGGTATAAT
CAGAGCATGGACCTTGAAGGATGCAAAAAAATGTGCTTGGCTTATTGCAATTGTACAGCC
TACTCAAATCTTGATGTTAGAAATGGCGGAAGTGGATGCTTACTCTGGTTTGGAGAACTC
ATTGATATTAGAGAGTTGAGCCACATTGAGCAAGACCTGTTCGTGAGAGTCGCTGCTTCA
GAATTAGACTCAGACGGGAATCGGAGGAGAAAGAGGTCAGCCCTGATTGCGATCATTTCA
GCAGTGGTAGCAGCTTTTATCCTCAGCTTTGTAGCTTGGTTTTCCTTCCAAAGAAAGAAC
AGAAGAACAGAAAAATATACTAGAGGTGCAGAAGTTGGAAACGAAGATCCCGAGTTGCCA
TTGTTTGATTTAGTTACTGTTACTAGTGCCACTAAAAACTTCTCTTCTGCTAATGTGATT
GGTGAGGGTGGCTTTGGACCAGTTTACAAGGGTATCCTACCAAATGGACAAGATATAGCA
GTAAAGAGGCCATCAAAGTATTCTGGACAAGGCGTTCAAGAGTTAAAAAATGAAATCGTT
CTCATTTCCAAGCTGCAGCACAGGAACCTTGTCAAGCTTTTGGGCTGTTGCCTTGAAGGA
GAAGAAAGGATGCTAATCTATGAGTTTATGCCAAACACTAGCTTGGACTATTTCATTTTT
GATCCAAGCAGAGATCCCTCACTTCCATGGAAGAACCGCTTTGAAATTGCTATGGGAATA
TCTCGAGGTCTTCTTTATCTTCACCAGGACTCAAGATTTAGAATTATTCATAGAGACCTC
AAGACCAGCAACATTTTATTAGATAGTGACTTGAATGCCAAAATTTCTGACTTCGGCCTT
GCCAAAAGTTTTGGCGGAGACCAAATGGAAGGAAAAACTAAGAGAGTAATAGGGACATAA

Peptide Sequence

PEP ID

XP_016461750.1
PEP Infomation

PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X2 [Nicotiana tabacum]
Sequence

MKGRPSLVFCSIFFSILIISTALDTITTDKPIRDGDTIVSAGGVYELGFFSPGNSKNRYV
GIWYKKISPRTVVWVANRNIPLNDTSGVLTLRPNGILVLINSSNASIWSSNSSRSLKNAE
ARLLDSGNLVVSDGNDRDPEINFAWQSFDYPGNTLLPGMKLGRNLVTGMDWYISSWKSTD
DPAPGECIERLDSHGYPQFFVWKNSSIVFSTGPWNGIAFSSSPNIKPTIYYTFGFVINQQ
EIYFKYELNEPLPTRIVINQAGTVDQLTWIERSHSWLLYVATQSDTCDRFSLCGPYASCN
INNSPPCDCLQGFEPRYPNQWYAADWSSGCVRRTPLACNQDGFLKLTGIKMPNSRHSWYN
QSMDLEGCKKMCLAYCNCTAYSNLDVRNGGSGCLLWFGELIDIRELSHIEQDLFVRVAAS
ELDSDGNRRRKRSALIAIISAVVAAFILSFVAWFSFQRKNRRTEKYTRGAEVGNEDPELP
LFDLVTVTSATKNFSSANVIGEGGFGPVYKGILPNGQDIAVKRPSKYSGQGVQELKNEIV
LISKLQHRNLVKLLGCCLEGEERMLIYEFMPNTSLDYFIFDPSRDPSLPWKNRFEIAMGI
SRGLLYLHQDSRFRIIHRDLKTSNILLDSDLNAKISDFGLAKSFGGDQMEGKTKRVIGT

Transcript Sequence

Gene sequence data has not been registered.